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Perl is still used in bioinformatics daily. People can write for days about why to use x instead of Perl, but at the end of the day, people can use modern perl
by latj 12y ago
Perl is still used in bioinformatics daily. People can write for days about why to use x instead of Perl, but at the end of the day, people can use modern perl 5 to do anything anyone can do in any other technical community.
The only serious downside to Perl (which is a pretty serious one I'll admit) is that it might be harder to lure in good programmers. I have met plenty of Perl programmers who advocate Perl because they are afraid to learn anything else. Still, I know a lot of Perl programmers who are so good they are not insecure and simply enjoy using it.
At this point, I only use Perl for ad-hoc data munging-- things that I could just as easily use python for.
- atmosx 12y agoHm, I'm using ruby for bio-informatics[1]. I've found the 'bio' gem pretty much complete, but there is a serious lack of documentation. The best option for scientific-related project, programming-wise appears to be Python because it has a huge set of libraries and much better documentation than ruby (and I guess perl too). [1] https://github.com/atmosx/dogma https://github.com/atmosx/dogma