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They also mention mediKanren, apparently built on miniKanren (which is some language for logic programming). I personally saw a lot of potential for these appr
by samuell 3y ago
They also mention mediKanren, apparently built on miniKanren (which is some language for logic programming).
I personally saw a lot of potential for these approaches, and wrote some future outlook stuff as part of my thesis here:
https://bionics.it/posts/linked-data-science https://bionics.it/posts/linked-data-science
There is some cool new tech coming out here lately, including TypeDB, which is a little like a modern version of Prolog with proper data storage and less cryptic language:
https://typedb.com/ https://typedb.com/
Unfortunately it seems to lack some of the expressive power that makes Prolog so well suited for integrating basically any outside data source on-the-fly :/
- sramsey 3y agoHi, I'm the organizer of the DeclMed workshop. Yes, nearly all the code for the NCATS Biomedical Data Translator is on GitHub, in a variety of project areas. The best place to start is the Translator developer documentation: https://ncatstranslator.github.io/translator-developer-documentation/ https://ncatstranslator.github.io/translator-developer-docum... once you've got an overview, click on the "Developer Guide" tab on the aforementioned page. Please reach out if you have any questions (https://lab.saramsey.org https://lab.saramsey.org)
- sramsey 3y agoI should have said, co-organizer of the workshop (with Will Byrd and Matt Might). Please also check out Tyler Beck's keynote (on Translator) at 5:24:35, and Sierra Moxon's talk on the Biolink semantic layer at 5:07:23, Chris Mungall's keynote on logic programming at 0:25:11, and Daniel Korn's presentation on drug repositioning at 6:58:01.
- pfisherman 3y agoHey sramsey. Glad to see the Translator is still going. I imagine that recent LLM mania has been a pretty big deal for the agent teams? Anyway, nice to see you around and say “Hi” to Noel and Christine for me ;)