I wrote my bachelor thesis in markdown with inline mathtex(?) and compiler it from there with pandoc. I also tried from/to HTML and the result is just bad. HTM

I wrote my bachelor thesis in markdown with inline mathtex(?) and compiler it from there with pandoc. I also tried from/to HTML and the result is just bad. HTML isn't suited at all to write scientific documents with proper formatting. Also I still need to do some things directly in latex and include them with inline latex in markdown. So no HTML+CSS isn't suited for this at all. At least for now where scientific papers are still DIN A4 real paper based/targeting. Maybe it's time to change that. People read papers a lot in 24" Monitors, tablets, laptops and e-book readers for all of this the current formatting sucks.