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What changed between the few-gene era and the polygene era is that we got sequencers that could read the genomes of an entire experimental cohort at reasonable
by maxander 8y ago
What changed between the few-gene era and the polygene era is that we got sequencers that could read the genomes of an entire experimental cohort at reasonable cost. Likewise, when we have the capability to do single-cell profiling of the epigenetic signature of an array of relevant cell types, for every member of your cohort, there’s decent odds biologists will think it ludicrous that we hoped to get meaningful results out of lone, unannotated, out-of-context genomes.
EDIT: I would specify that I'm not saying that experimental biology "doesn't work" or doesn't get meaningful results before the bigger new technology arrives. I think the Slate Star Codex article overstates the helplessness of single-gene theories, which did explain a bunch of diseases and simple attributes, and had significant medical impacts in understanding things like cancer and chemotherapy effectiveness. It just failed to accomplish a set of other things that people wanted, like explaining intelligence or height. Each new advance (cheap genome sequencing, epigenetic readouts, hugely longitudinal metabolomics, molecule-level microscopy, and the hundred-plus advances in this direction we haven't even conceived of yet) expands the territory of what we can address through molecular biology.
Scientists are often really optimistic about whether topics of interest lie inside or without this territory at a given moment, which I think has to do more with the incentives of grant writing than anything else.
- eli_gottlieb 8y agoYeah, the hidden caveat is that in a lot of cases, science "suddenly" progresses when scientists get access to better equipment or get trained in new methods, and can suddenly admit to our funders that the things we were doing before sucked.
- toasterlovin 8y agoI dunno. There's a lot to be said for squeezing as much as you can out of whatever technology you currently possess. The current iteration of sequencing will surely be looked back on as woefully inadequate, but we're learning a ton with it now.
- joe_the_user 8y agoThe problem is I don't think that possibility can be evoked for situations where one discovers more and more things are part of a single, vast, interrelated system. At least until we get "AI Complete" approach, we can't expect to suddenly a means to "debug" a system crudely analogous to a "million lines of spaghetti code" (and yes, only crudely analogous but the ways that analogy break down only makes the whole thing harder to understand).