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> Getting anywhere near the quality of the Human Genome Project is not possible. That is an unrealistic and inappropriate metric to use. The HiSeq X isn't mea
by searine 9y ago
> Getting anywhere near the quality of the Human Genome Project is not possible.
That is an unrealistic and inappropriate metric to use.
The HiSeq X isn't mean for making new human reference genomes. It's meant for re-sequencing at scale, and speaking from personal experience, it does an incredible job in quality, speed, and cost.
Even if we could reach reference assembly quality with a hiseq run, we wouldn't want to use it that way. Having
reference genomes and annotations (hg19 and hg38) means we can compare and contrast individuals from a common foundation. It would increase the cost and time of genome analysis 100 fold if we had to do denovo assemble for each individual sequenced.