bafe

30 ms·

151.
by bafe 3y ago
The same happened to jython which is all but dead and stuck forever at python 2.7 If you stick to "pure Python" there's a larger chance you can use any python runtime and be able to run your code
152.
by bafe 3y ago
Not likely, particularly if you depend on modules written (partly) in C like numpy/scipy etc
153.
by bafe 3y ago
You can't go wrong with nextflow. I heard a lot of scientists complaining that it's too hard to understand, but honestly the DSL and the scheduling model (flow based) is just great
154.
by bafe 3y ago
I'd add ELN/LIMS in the same category. At first they just look like some CRUD app, but each uses a slightly different data model, different plugin system and (often outdated) scripting language built-in the system.
155.
by bafe 3y ago
Nextflow seems to scale very well
156.
by bafe 3y ago
The reliance on filenames to define (parametric) dependencies was among the reasons I later adopted nextflow. The model fit the type of computation dependencies better for my case. In the mean time snakemake grew and many DAG that were hard
157.
by bafe 3y ago
There is indeed an old issue asking whether they could return a provenance graph using the prov ontology in JSON format https://github.com/snakemake/snakemake/issues/2077 I think it's a good task to work
158.
by bafe 3y ago
I love snakemake. It almost saved my PhD, but then I found nextflow which suited my type of problems better. What's is slightly off-putting about snakemake is that the internal API isn't well documented, I wanted to contribute a n
159.
by bafe 3y ago
Isn't this what powershell tries to do,with the difference that it's structured objects being passed instead of tables?
160.
by bafe 3y ago
A signing bonus the size of an average software engineer salary here...and I'm in a very wealthy country
161.
by bafe 3y ago
Improve my running, grow more plants and work on personal SDR projects
162.
by bafe 3y ago
At the same time very minor (not bad, just not as important) PEPs are accepted all the time, particularly regarding type hints and module magic methods. I love the "new python" with the type hints, but in retrospect more effort sh
163.
by bafe 3y ago
Which sounds more like a fairly standard allergic reaction and definitely less scary than the title would suggest
164.
by bafe 3y ago
Thanks for the clarification! I'll read more about it, I'm quite curious to see how these clauses are implemented in Trino
165.
by bafe 3y ago
That's great! How about performance? Say I want to use MATCH_RECOGNIZE on a postgresql backend, is the compiled query going to be significantly less performant as compared as the same query on databases that support (oracle) that state
166.
by bafe 3y ago
That's a good point. Additionally, it seems the standard isn't freely available and I doubt most of the developers of existing SQL DBs partecipate in drafting new standards. It seems it is doomed to diverge even further, which beg
167.
by bafe 3y ago
Great thanks, if I understand it right, instead of having a new database engine, Trino compiles the statement into the query languages of the different backends and runs these queries in a distributed way?
168.
by bafe 3y ago
Great, thanks! It's really encouraging to see a community today were the moderators/owners reach out to users directly.
169.
by bafe 3y ago
Your website is great and I regularly check it to see what's new in various implementations. Unfortunately it seems that many databases don't support many modern SQL features yet. Any ideas as to why?
170.
by bafe 3y ago
Thank you all! I'm a very new user, and perhaps not as good as a writer as most of you, but I am definitely a legit poster, not a spammer
171.
by bafe 3y ago
Indeed,from my understanding of history it seems that lisp brought the idea of homoiconicity through the use S-expressions. Scheme was the first to introduce lexical scoping and in general the idea of constructing the language on a small se
172.
by bafe 3y ago
All great features, but unfortunately most SQL DBs still miss the implementation of features from SQL:2016 like MATCH_RECOGNIZE. I wonder what's the purpose of an ever growing standard when most implementations only support a small sub
173.
by bafe 3y ago
The title is really misleading. I was expecting a camera without lens, using a type of light sensitive array and reconstructing the focused image using AI
174.
by bafe 3y ago
I'm not so sure about cyby2, the persistence is based on "conventional" relational DBs. Judging by the paper, the main goal wasn't developing a specialised functional data structure to store molecules