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Since sqlite people are probably in this thread - why is storing genomic data as a sqlite tar with all the metadata you want in tables a “Bad Idea” (tm)? Like t
by conception 1mo ago
Since sqlite people are probably in this thread - why is storing genomic data as a sqlite tar with all the metadata you want in tables a “Bad Idea” (tm)? Like toss a fastq or bam plus all the downstream data, grant info, experiment parameters, specimen info etc etc in a single file easily parsable.
- Hendrikto 28d agohttps://sqlite.org/appfileformat.html https://sqlite.org/appfileformat.html It is not a bad idea. It is a very flexible and stable format.