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MPI is essential for molecular dynamics simulations. You split the "box" of atoms/molecules up into different domains -- one on each processor. Occasionally y
by Xcelerate 14y ago
MPI is essential for molecular dynamics simulations. You split the "box" of atoms/molecules up into different domains -- one on each processor. Occasionally you'll have particles wander into the next box. The information of these ghost particles must be passed around and MPI facilitates this.