Most Oxford Nanopore basecallers use DL these days. And if you want a high quality de novo assembly, DL based methods are often used for error correction and fi

Most Oxford Nanopore basecallers use DL these days. And if you want a high quality de novo assembly, DL based methods are often used for error correction and final polishing. There are a lot of differences between the cutting-edge methods that produce the best results, the established tools the average researcher is comfortable using, and whatever you are allowed to use in a clinical setting.