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What about Nextflow?
by torrance 2y ago
What about Nextflow?
- andbberger 2y agoI considered Nextflow before begrudgingly settling on snakemake for my current project. Didn't record why... possibly because snakemake was already a known quantity and I was under time pressure or because I felt the task DAG would be difficult to specify in WDL. It's certainly the most mature of the bunch.
- _Wintermute 2y agoNobody wants to write or debug groovy, especially scientists who are used to python. It also causes havoc on a busy SLURM scheduler with its lack of array jobs (heard this is being fixed soon).