When molecules have formed, and are in relatively static conditions, even then animating them is quite difficult. The wavefunction is a complex function of posi

When molecules have formed, and are in relatively static conditions, even then animating them is quite difficult. The wavefunction is a complex function of position and time, so you have to show 6+2 dimensions on a 2D screen. During molecule formation, you need more than quantum mechanics. You need quantum field theory, to create an accurate picture of the dynamics. Quantum field theory has a lot more dimensions, and there is stuff like virtual particle creation and what not. It is not at all easy to show this on a 2D screen.