A bigger problem I've had with issue references is in commits. A repo we used as template was using "Fixes #123" in commits messages, to close tickets filled ag

A bigger problem I've had with issue references is in commits. A repo we used as template was using "Fixes #123" in commits messages, to close tickets filled against that template repo. The problem is that when the updated template was merged in the downstream repo, it would close issues in each of them too...