If operating with the best model you have is intuitive and not logical, then everything in science it intuitive and not logical, so we might have to redefine yo

If operating with the best model you have is intuitive and not logical, then everything in science it intuitive and not logical, so we might have to redefine your use of "logical" to be more useful. When you're defending a position now known to be wrong, this sort of statement is more rude than it is enlightening (or convincing).