3 ms·
In response to the multiple people asking if base editing and CRISPR are the same, the answer is: not quite. Same idea, different enzyme. The enzyme used by CR
by fastball 4y ago
In response to the multiple people asking if base editing and CRISPR are the same, the answer is: not quite. Same idea, different enzyme.
The enzyme used by CRISPR is Cas9 (which is why you'll often see it referred to as CRISPR-Cas9), which acts like a pair of molecular scissors and cuts strands of DNA at a specific point in the genome.
Base editing is a newer technique and utilizes an enzyme called deaminase, which can change the chemical structure of a base pair without doing the "cutting" part. There are specific deaminases based you use depending on which base pair you're trying to modify.
To oversimplify a bit: base editing is a more precise version of CRISPR, which is less likely to cause more changes than actually desired, as is a problem with CRISPR. That doesn't make CRISPR obsolete though, because if your goals actually is to remove entire portions of a genome, CRISPR is a more effective technique. Regardless, there is a lot of overlap between the methods: both usually use adenoviruses as the delivery vehicle, you can use both enzymes in tandem, etc.
- nine_k 4y agoThe word more understandable for the software developer crowd would be "patching". That is, changing a base pair in place.
- govg 4y agoI took it to mean doing an in place patch / removal of code (CRISPR) vs doing a more general refactor that results in cleaner code (base pair editing).
- stanford_labrat 4y agoFor clarification, most base editors are a fusion protein with cas9 and the actual editing protein.
- dpatrick86 4y agoSome use cas9, such as dead cas9 (has endonuclease activity removed), and others do not. Great interview where Dr. George Church talks base editing and CRISPR: https://www.foundmyfitness.com/episodes/george-church https://www.foundmyfitness.com/episodes/george-church