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The fastest way to do a lot of genomics stuff is with FPGA accelerators, which also aren't used by most of the other tenants in a multi-tenant scientific comput
by pclmulqdq 4y ago
The fastest way to do a lot of genomics stuff is with FPGA accelerators, which also aren't used by most of the other tenants in a multi-tenant scientific computing center. The cloud is perfect for that kind of work.
- bee_rider 4y agoThat's interesting. It is sort of funny that I was right (putting genomics in the "maybe good for cloud" bucket) for the wrong reason (characterizing it as more suited for general-purpose commodity resources, rather than suited for the more niche FPGA platform).
- chrchang523 4y agoThis is a bit overstated. Yes, FPGA accelerators can be used effectively in some common genomics workflows. However, my experience is that the right software running on regular Intel/AMD/ARM processors is very competitive with FPGA-using solutions.