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In the biological sciences there is a huge push for the code to be released alongside the paper. Many publications (but not enough yet) include a complete pipel
by gww 5y ago
In the biological sciences there is a huge push for the code to be released alongside the paper. Many publications (but not enough yet) include a complete pipeline in a workflow language that downloads, processes the data and generates the figures used in the paper.
- toomuchtodo 5y agoWhat’s the language de jour typically leveraged to declare these workflows?
- semi-extrinsic 5y agoSince GP mentions biology, I would guess R is the first choice.
- gww 5y agoNextflow and Snakemake are quite common. I prefer the later as I have a lot of Python experience.