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DiffEqBayes.jl can transpile Julia ODE code to Stan. This is a nice interface to use Stan directly from Julia, and also makes it easy to benchmark the ODE infer
by ChrisRackauckas 6y ago
DiffEqBayes.jl can transpile Julia ODE code to Stan. This is a nice interface to use Stan directly from Julia, and also makes it easy to benchmark the ODE inference in a bunch of PPLs. Some benchmarks:
https://benchmarks.sciml.ai/html/ParameterEstimation/DiffEqBayesLotkaVolterra.html https://benchmarks.sciml.ai/html/ParameterEstimation/DiffEqB...
https://benchmarks.sciml.ai/html/ParameterEstimation/DiffEqBayesFitzHughNagumo.html https://benchmarks.sciml.ai/html/ParameterEstimation/DiffEqB...