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Parsing the flatfile of Swiss-Prot in detail is the best way to lose your sanity ;) I know because that is part of my day job. It's gotten better but I highly
by jerven 7y ago
Parsing the flatfile of Swiss-Prot in detail is the best way to lose your sanity ;) I know because that is part of my day job.
It's gotten better but I highly recommend you either use the RDF or XML. The flatfile looks easy but is an endless source of bugs and urgent changes.
- dalke 7y agoI did say it was 20 years ago. ;) Since then I've been working in cheminformatics. Which has its own forms of insanity.
- jerven 7y agoCan I just say that these day's you can search Swiss-Prot with InchiKey's due to our integration with rhea (https://www.uniprot.org/news/2018/12/05/release https://www.uniprot.org/news/2018/12/05/release)