Please remember, that these ontologies describe biological systems and are used as a standard for common nomenclature. It's orders of magnitudes harder to deriv

Please remember, that these ontologies describe biological systems and are used as a standard for common nomenclature. It's orders of magnitudes harder to derive an ontology describing the localization of proteins in the cell by an algorithm, compared to w2v. Even then, there would be the fundamental issue that the ontology needs to be consistent over time in order to be useful.