4 ms·
Just in time to vie for "most overhyped scientific headline of 2010." The paper, "Bimodal gene expression in noncooperative regulatory systems" (available at h
by jforman 16y ago
Just in time to vie for "most overhyped scientific headline of 2010."
The paper, "Bimodal gene expression in noncooperative regulatory systems" (available at http://www.pnas.org/content/107/51/22096.full http://www.pnas.org/content/107/51/22096.full), addresses the question of how bacterial populations achieve bimodal phenotypic distributions (basically, 1 blue cell goes in, 5 blue cells and 5 pink cells come out in a stable ratio, wtf).
This phenomenon has previously been explained by a) cooperativity or b) feedback loops. Cooperativity is a phenomenon in molecular biology where the binding of one protein to, say, DNA will increase the rate of binding of a partner in crime (which can, say, turn a gene on) -- this is a relatively simple regulatory scheme that allows proteins that respond in linear fashion to their environment to produce a non-linear output. Feedback loops are pretty self-explanatory (one thing worth mentioning is that if the feedback loop involves the transcription of a gene, then it is much slower-acting than cooperativity).
Cooperativity can explain the bimodal distribution problem because cooperative systems can act as "regulatory switches" where very small fluctuations in environment can result in very different behavior (see http://bioweb.wku.edu/courses/biol566/Images/MCB3-29hemoglobin.JPG http://bioweb.wku.edu/courses/biol566/Images/MCB3-29hemoglob... for a simplistic example of hemoglobin response to oxygen). Thus, one blue cell goes in, 10 cells come out with very slight environmental differences that are on this response-boundary - voila, 5 blue cells, 5 pink cells.
Anyway, this paper shows that a cell population can have a bimodal phenotypic distribution without cooperativity, simply by having single proteins that respond in non-linear fashion to their environment. That's...a new statistical law?
I don't have the time to fully deconstruct this paper, but after a skim I'm left with the question, "so how does a single protein achieve non-linear response?" This paper seems to provide a mathematical model without giving a good explanation for how it would be achieved in nature. The only answer I can come up with is cooperativity within the protein itself - say, cooperative allosteric regulation. Which would make the theoretical contribution of this paper a lot less exciting.
- tel 16y agoI think it was also supposed to be read as "new law based on statistical theory" not "new law of statistical theory".
- carbocation 16y agoThe overstatement in the headline reminds me about the article posted earlier this year in which someone rediscovered integration: http://care.diabetesjournals.org/content/17/2/152.abstract http://care.diabetesjournals.org/content/17/2/152.abstract
- gphil 16y agoThis is funny, I can't believe this made it past a peer review.
- Confusion 16y agoTo add insult to injury, the article is cited dozens of times. This is extremely disappointing and worrying. It raises a whole score of questions regarding both the intelligence, the knowledge and the moral fiber of people participating in medical research.
- shadowfox 16y agoWell. You cant really tell that without trawling through the papers themselves. For all you know many of them are refutations. (This is not the first time that someone managed to publish something awkward like that; Academics often flock to this sort of thing like sharks on a blood trail. You can get a lot of leverage by publishing early refutations)
- mikecane 16y agoThis comment with probably get a downvote but I just have to say it's Comments like yours that make coming here more worthwhile than the links many times! Thank you.