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Yes, this is very common. But there are also many people who use Common Workflow Language (https://www.commonwl.org/ https://www.commonwl.org/) for this purpos
by cure 7y ago
Yes, this is very common.
But there are also many people who use Common Workflow Language (https://www.commonwl.org/ https://www.commonwl.org/) for this purpose.
CWL allows for workflow portability between execution engines. The open source engine my team creates (Arvados - https://arvados.org https://arvados.org) is ideal for large-scale processing work.
We store, process and manage petabytes of genome data with it, and execute workflows that span hundreds of simultaneous compute nodes.
- joycian 7y agoThis looks very cool! Thanks for sharing it. I'm definitely going to mention this in the next technical meeting at the research group.