3 ms·

Seems like a good time to link to this curated list of pipeline toolkits (not all python). https://github.com/pditommaso/awesome-pipeline/blob/master/README.m

• neuromantik8086 8y ago
  This too: https://github.com/common-workflow-language/common-workflow-language/wiki/Existing-Workflow-systems https://github.com/common-workflow-language/common-workflow-... Also, whenever these conversation of flow-based / piplining tools come up, I always like to point people to Common Workflow Language to remind people that there is an attempt at standardizing workflow descriptions so that they can be used with different packages: https://www.commonwl.org/ https://www.commonwl.org/