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Most uses are in rather obscure bioinformatics packages, where the exact matching of sequences is useful, including BWT compression of the arrays. Easy to Googl
by fnl 9y ago
Most uses are in rather obscure bioinformatics packages, where the exact matching of sequences is useful, including BWT compression of the arrays. Easy to Google, but I don't know if any pure-Python versions not written in C exist, and having seen colleagues argue about the best/most correct implementation, I prefer not to link any (Google is your friend...). But so any interesting performance comparison would probably be against a pure C implementation.