I started TrakEM2: register/edit/analyze/3D model terabytes of images. For scientific image processing -mostly neuroscience, mostly electron microscopy images,

I started TrakEM2: register/edit/analyze/3D model terabytes of images. For scientific image processing -mostly neuroscience, mostly electron microscopy images, but also other fields and imaging techs. http://repo.or.cz/w/trakem2.git http://repo.or.cz/w/trakem2.git http://www.ini.uzh.ch/~acardona/trakem2.html http://www.ini.uzh.ch/~acardona/trakem2.html It's based off ImageJ. And yes it is in Java, with plenty of jython scripting on top.