In my experience, academia's brokenness has been greatly exaggerated. All medium-to-large human organizations are broken to some extent. And exactly what are

In my experience, academia's brokenness has been greatly exaggerated. All medium-to-large human organizations are broken to some extent. And exactly what are the concrete outlines of these mythical "organizations that do not damage actual science in order perpetuate themselves" that you propose to replace academia with?