3 ms·
Another implementation of the Burrows-Wheeler transform is BWA, by the same folks who made Maq. Both Bowtie and BWA can output SAM and/or BAM (binary SAM), whic
by carbocation 17y ago
Another implementation of the Burrows-Wheeler transform is BWA, by the same folks who made Maq. Both Bowtie and BWA can output SAM and/or BAM (binary SAM), which is the file format used by the 1000 Genomes project and the (highly useful) GATK.