The clinical work they're doing is great, but the code is problematic. Its a bunch of Perl and Python duct taped together with shell scripts. From the github

The clinical work they're doing is great, but the code is problematic. Its a bunch of Perl and Python duct taped together with shell scripts. From the github repo: Shell 84.3% Perl 8.9% Python 6.3% C 0.5% Check out the source https://github.com/chiulab/surpi https://github.com/chiulab/surpi